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Discrimination of freshwater fish species by Matrix-Assisted Laser Desorption/Ionization- Time Of Flight Mass Spectrometry (MALDI-TOF MS): a pilot study
2012
Journal:  
Journal of Limnology
Author:  
Abstract:

In this study we discriminate three freshwater fish species (the shad Alosa agone Scopoli 1786, the whitefish Coregonus macrophthalmus Nüsslin1882 and the roach Rutilus rutilus Linnaeus 1758) by Matrix-Assisted Laser Desorption/Ionization- Time Of Flight Mass Spectrometry (MALDI-TOF MS) using both muscle and liver tissues. The technology enables to analyze tissues after a simple single-step extraction procedure without any further purification. The molecular profile of muscle tissues showed the most intense peaks at m/z range of 11,354.0 (±2.0 SD) Da, 3508.5 (±1.5 SD) Da and 8567.2 (±1.1 SD) Da for the shad, the whitefish and the roach respectively. The molecular profiles of liver tissues exhibit most of the highest peak intensities in the range between 2000 and 6000 m/z values. The roach shows the clearest pattern with high intensities detected at mass ranges between 3000 and 3550 Da with maxima at m/z 3035.2 (±0.2) Da and 3468.7 (±0.3) Da. The shad shows a shared high peak at m/z 3429.0 (±0.3) Da. The whitefish shows a group of major peaks in the m/z range of 3000-3700 Da with the highest being at 3635 (±0.3) Da. The overall signal pattern generated is highly specific for each species and, according to cluster analyses based on the total number of peaks, we could discriminate the three species. Pietro Volta, CNR Institute of Ecosystem Study Volta, Pietro, Nicoletta Riccardi, Rosaria Lauceri, and Mauro Tonolla. 2012. “Discrimination of Freshwater Fish Species by Matrix-Assisted Laser Desorption/Ionization- Time Of Flight Mass Spectrometry (MALDI-TOF MS): A Pilot Study”. Journal of Limnology 71 (1):e17. https://doi.org/10.4081/jlimnol.2012.e17. More Citation Formats ACM ACS APA ABNT Chicago Harvard MLA Turabian Vancouver Download Citation Endnote/Zotero/Mendeley (RIS) BibTeX Downloads Download data is not yet available. Citations List of Cited By : The application of “-omics” technologies for the classification and identification of animals Michael J. Raupach, Rudolf Amann, Quentin D. Wheeler, Christian Roos Organisms Diversity & Evolution : 2016 A MALDI-TOF mass spectrometry-based approach for molecular profiling of leaves from pasture and feed forages species Cínthia C. Bonatto, Luciano P. Silva Biochemical Systematics and Ecology : 2021 Determination of adulteration, geographical origins, and species of food by mass spectrometry Han‐Ju Chien, Yi‐Feng Zheng, Wei‐Chen Wang, Cheng‐Yu Kuo, Yu‐Ming Hsu, Chien‐Chen Lai Mass Spectrometry Reviews : 2022 Agricultural Proteomics Volume 1 Pedro M. 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Murray Analytica Chimica Acta : 2013 Intact cell mass spectrometry as a rapid and specific tool for the differentiation of toxic effects in cell-based ecotoxicological test systems Sascha Liane Kober, Henriette Meyer-Alert, Desirée Grienitz, Henner Hollert, Marcus Frohme Analytical and Bioanalytical Chemistry : 2015 Comparison of Rapid Biodiversity Assessment of Meiobenthos Using MALDI-TOF MS and Metabarcoding Sven Rossel, Sahar Khodami, Pedro Martínez Arbizu Frontiers in Marine Science : 2019 Comprehensive Foodomics Melanie Pavlovic, Ingrid Huber, Ulrich Busch New method for the identification of arbuscular mycorrhizal fungi by proteomic-based biotyping of spores using MALDI-TOF-MS Thomas Crossay, Cyril Antheaume, Dirk Redecker, Lucie Bon, Nicolas Chedri, Clément Richert, Linda Guentas, Yvon Cavaloc, Hamid Amir Scientific Reports : 2017 Evaluation of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the discrimination of Lacticaseibacillus species Eiseul Kim, Seung-Min Yang, Eun-Ji Cho, Hae-Yeong Kim Food Microbiology : 2022 Proteomic fingerprinting facilitates biodiversity assessments in understudied ecosystems: A case study on integrated taxonomy of deep sea copepods Jasmin Renz, Elena L. Markhaseva, Silke Laakmann, Sven Rossel, Pedro Martinez Arbizu, Janna Peters Molecular Ecology Resources : 2021 Proteomic fingerprinting enables quantitative biodiversity assessments of species and ontogenetic stages in Calanus congeners (Copepoda, Crustacea) from the Arctic Ocean Sven Rossel, Patricia Kaiser, Maya Bode‐Dalby, Jasmin Renz, Silke Laakmann, Holger Auel, Wilhelm Hagen, Pedro Martínez Arbizu, Janna Peters Molecular Ecology Resources : 2023 MALDI-TOF Mass Spectrometry Applications for Food Fraud Detection Carlo Zambonin Applied Sciences : 2021 Lebensmittelanalytik Reinhard Matissek, Markus Fischer, Gabriele Steiner Springer-Lehrbuch : 2018 Comparison of five preparatory protocols for fish species identification using MALDI-TOF MS Gesche Spielmann, Ingrid Huber, Marzena Maggipinto, Gerhard Haszprunar, Ulrich Busch, Melanie Pavlovic European Food Research and Technology : 2018 Microbiological Identification using MALDI‐TOF and Tandem Mass Spectrometry Ruth Walker, Maria E. Dueñas, Alan Ward, Kaveh Emami Advanced Mass Spectrometry for Food Safety and Quality Yolanda Picó Comprehensive Analytical Chemistry : 2015 Lebensmittelanalytik Reinhard Matissek, Markus Fischer Perspectives of species identification by MALDI‐TOF MS in monitoring—Stability of proteomic fingerprints in marine epipelagic copepods Janna Peters, Silke Laakmann, Sven Rossel, Pedro Martínez Arbizu, Jasmin Renz Molecular Ecology Resources : 2023 Identification of freshwater zooplankton species using protein profiling and principal component analysis Radovan Hynek, Stepanka Kuckova, Pavel Cejnar, Petra Junková, Ivo Přikryl, Jana Říhová Ambrožová Limnology and Oceanography: Methods : 2018 Visualization of the Distance among Fishes by MALDI MS for Rapid Determination of the Taxonomic Status of Fish Fillets Chengyu Wang, Hongyan Bi, Jing Xie Journal of Agricultural and Food Chemistry : 2020 Testing the Applicability of MALDI-TOF MS as an Alternative Stock Identification Method in a Cryptic Species Complex Gabor Maasz, Zita Zrínyi, Istvan Fodor, Nóra Boross, Zoltán Vitál, Dóra Ildikó Kánainé Sipos, Balázs Kovács, Szilvia Melegh, Péter Takács Molecules : 2020 Rapid species level identification of fish eggs by proteome fingerprinting using MALDI-TOF MS Sven Rossel, Andrea Barco, Matthias Kloppmann, Pedro Martínez Arbizu, Bastian Huwer, Thomas Knebelsberger Journal of Proteomics : 2021 Proteomic-based biotyping reveals hidden diversity within a microalgae culture collection: An example using Dunaliella Kaveh Emami, Ethan Hack, Andrew Nelson, Chelsea M. 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Rodrigues, Alexandre Campos, Jacob Kuruvilla, Denise Schrama, Susana Cristobal Automatic specimen identification of Harpacticoids (Crustacea:Copepoda) using Random Forest and MALDI‐TOF mass spectra, including a post hoc test for false positive discovery Sven Rossel, Pedro Martínez Arbizu, Steven Kembel Methods in Ecology and Evolution : 2018 Integrative Description of Cryptic Tigriopus Species From Korea Using MALDI-TOF MS and DNA Barcoding Jisu Yeom, Nayeon Park, Raehyuk Jeong, Wonchoel Lee Frontiers in Marine Science : 2021 Use of MALDI-TOF MS to Discriminate between Aflatoxin B1-Producing and Non-Producing Strains of Aspergillus flavus Lukas Hleba, Miroslava Hlebova, Anton Kovacik, Jana Petrova, Zuzana Maskova, Juraj Cubon, Peter Massanyi Molecules : 2022 Comparison of molecular species identification for North Sea calanoid copepods (Crustacea) using proteome fingerprints and DNA sequences S. Laakmann, G. Gerdts, R. Erler, T. Knebelsberger, P. Martínez Arbizu, M.J. Raupach Molecular Ecology Resources : 2013 A novel approach for the determination of freshness and identity of trouts by MALDI-TOF mass spectrometry Sebastian Ulrich, Philipp–Michael Beindorf, Barbara Biermaier, Karin Schwaiger, Manfred Gareis, Christoph Gottschalk Food Control : 2017 Food Authentication and Traceability Ibrahim Bello, Miray Simsek, Saheed Olorunnisola, Fatimah Babiker, Ademola Monsur Hammed Proteomics in Food Science Eva M. Rodríguez, Ignacio Ortea Mayfly and fish species identification and sex determination in bleak ( Alburnus alburnus ) by MALDI-TOF mass spectrometry G. Maasz, P. Takács, P. Boda, G. Varbiro, Z. 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Registered in print in Verbania, 7-10-1959, n. 58.

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